CDS

Accession Number TCMCG057C17943
gbkey CDS
Protein Id XP_018481247.1
Location complement(join(17406259..17407027,17407468..17407870,17408230..17408242))
Gene LOC108852241
GeneID 108852241
Organism Raphanus sativus

Protein

Length 394aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018625745.1
Definition PREDICTED: protein SHOOT GRAVITROPISM 5-like isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description nucleic acid binding transcription factor zinc ion binding
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006109        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009590        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009959        [VIEW IN EMBL-EBI]
GO:0009965        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010031        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010600        [VIEW IN EMBL-EBI]
GO:0010601        [VIEW IN EMBL-EBI]
GO:0010675        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0032350        [VIEW IN EMBL-EBI]
GO:0032352        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032881        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046885        [VIEW IN EMBL-EBI]
GO:0046886        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048444        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050879        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090354        [VIEW IN EMBL-EBI]
GO:0090355        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0090696        [VIEW IN EMBL-EBI]
GO:0090697        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:2000012        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000904        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCATCATTGATCCAGATGCAGAAGTTGTGTCACTATCACCAAGAACTCTTCTTGAATCAGATAGATACATATGTGAGATCTGTAACCAAGGGTTTCAAAGAGATCAAAATCTCCAGATGCATCGAAGACGTCACAAGGTTCCATGGAAGCTTCTGAAGAGAGACAGCAACATAGAGGTGAAGAAACGAGTCTATGTTTGCCCTGAACCCACTTGTTTTCACCATGATCCTTTTCATGCTCTTGGAGATCTTGTCGGAATAAAAAAACATTTCAGACGAAAGCACAGCAACCATAAGCAGTGGGTTTGTGAGAAATGTTCTAAAGGTTATGCTGTTCAATCAGATTACAAAGCTCATCTCAAAACTTGTGGCACTAGAGGTCATTCTTGTGACTGTGGTCGCGTCTTCTCCAGGGTGGAGAATTTTATTGAACATCAAGATAACTGTTCTGTAAGGAACGTTCGCCAGGAACCACCGCCACCGCCACAAACCGCCGTCATTGTCACGGCCTGCTCCTCTAGAACCGCCTCAACGGCAAGCACTCCATCTACCGAAACGAACTACGGTGGTGCGGCTGTGGTTGCGACTCCTCTACCTTTAGAAGGACGTCCAATTCATATCAGAAACTCATCTTTAGCGCCTTTAGCTCTCACCAACTCATCAAATCTCAACCTCGAACTTCAGCTTCTTCCATTGACGCCAAATATAAACCCTAATCAACAAAACCAACAACACCAAGTTAAAGAACCATCTCTTCATCATCATCATCATAGTCATGACGCCACAAGCTTAAACCTCTCCATTGCTCCATCATCATCCTATCATCACTACAACAATTTTGATCGCATAAAAGAAATAATAGCGAGTGAACAGATCATGAATGTAGCGATGAAGGAGAAAGCTTCTGCGGAGGAAGCTAAAAGAGAAGCAAAGAGACAACGAGAGATAGCGGAAAATGAGTTTGAGAATGCGAAGAAGATAAGGCAACAAGCACAAACTGAGCTTAAGAGAGCTAAGCTTTTAAAGGAACAATCTATGAAGAAGATAAGCTCAACGATTATGCAAGTTACTTGTCAAACTTGCAAAGGACAGTTTGAAGTGGTTCCCGCAGCTGCGACGGAAGAGACATCTCTTGTGGTGAGTTACATGTCGTCAACGAATACTGACGGAGGGGGATCATAG
Protein:  
MGIIDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDSNIEVKKRVYVCPEPTCFHHDPFHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVENFIEHQDNCSVRNVRQEPPPPPQTAVIVTACSSRTASTASTPSTETNYGGAAVVATPLPLEGRPIHIRNSSLAPLALTNSSNLNLELQLLPLTPNINPNQQNQQHQVKEPSLHHHHHSHDATSLNLSIAPSSSYHHYNNFDRIKEIIASEQIMNVAMKEKASAEEAKREAKRQREIAENEFENAKKIRQQAQTELKRAKLLKEQSMKKISSTIMQVTCQTCKGQFEVVPAAATEETSLVVSYMSSTNTDGGGS